Publications 1992–2021

Publications of the group from 1992 to 2021, newest first. For recent work, see Publications; for PhD and MSc work, see Dissertations and Theses.

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2021

Ádám Zlatniczki, Marcell Stippinger, Zsigmond Benkő, Zoltán Somogyvári, András Telcs: Relaxation of Some Confusions about Confounders Entropy 23 (11), 1450, 2021 (journal paper)
Daniel Gero, Bálint File, Daniela Alceste, Lukas D. Frick, Michele Serra, Aiman E.M. Ismaeil, Robert E. Steinert, Alan C. Spector and Marco Bueter: Microstructural changes in human ingestive behavior after Roux-en-Y gastric bypass during liquid meals. JCI insights, Volume 6, Issue 15, 9 August 2021, https://doi.org/10.1172/jci.insight.136842. (journal paper)
Zsigmond Benkő, Zoltán Somogyvári: Reconstructing shared dynamics with a deep neural network, arXiv:2105.02322 . (abstract)
Róbert Tóth, Albert Miklós Barth, Andor Domokos , Viktor Varga, Zoltán Somogyvári: Do not waste your electrodes – principles of optimal electrode geometry for spike sorting Journal of Neural Engineering doi: https://doi.org/10.1088/1741-2552/ac0f49 (2021) (journal paper)
Bálint Varga, Bettina Soós, Balázs Jákli, Eszter Bálint, Zoltán Somogyvári, László Négyessy: Network path convergence shapes low-level processing in the visual cortex Frontiers in Systems Neuroscience doi: 10.3389/fnsys.2021.645709 (2021) (journal paper)
Richárd Fiáth, Domokos Meszéna, Zoltán Somogyvári, Mihály Boda, Péter Barthó, Patrick Ruther & István Ulbert : Recording site placement on planar silicon-based probes affects signal quality in acute neuronal recordings Scientific Reports 11 Article number: 2028 (2021) (journal paper)
Emília Tóth, Virág Bokodi, Zoltán Somogyvári, Zsófia Maglóczky, Lucia Wittner, István Ulbert, Loránd Eross, Dániel Fabó: Laminar distribution of electrically evoked hippocampal short latency ripple activity highlights the importance of the subiculum in vivo in human epilepsy, an intraoperative study. Epilepsy Research, 106509 (journal paper)
Emese Pálfi, György Lévay, András Czurkó, Balázs Lendvai, Tamás Kiss: Acute blockade of NR2C/D subunit-containing NMDA receptors modifies sleep and neural oscillations in mice. Journal of Sleep Research, 2020 Dec 13;e13257 (journal paper)

2020

Zsigmond Benkő, Marcell Stippinger, Roberta Rehus, Attila Bencze, Dániel Fabó, Boglárka Hajnal, Loránd Erőss, András Telcs, Zoltán Somogyvári: Manifold-adaptive dimension estimation revisited ,arXiv:2008.03221 . (abstract)
Tóth, B., Boncz, Á., File, B., Winkler, I., & Molnár, M. A humán agyi aktivitás hálózatelemzési modellezése–Humán agyi hálózatok. Scientia et Securitas, 1(1), 21-28. (journal paper in Hungarian)
F Z Fedor, C Paraczky, · L Ravasz, · K Tóth, Borhegyi, Z Somogyvári, G Juhász, Z Fekete: Electrophysiological and behavioral properties of 4‑aminopyridine‑induced epileptic activity in mice Biologia Futura, https://doi.org/10.1007/s42977-020-00047-z (journal paper)
Kozak R, Kiss T, Dlugolensi K, Johnson D, Gorczyca RR, Kuszpit K, Harvey B, Stolyar P, Sukoff Rizzo SJ, Hoffmann W, Volfson D, Hajós M, Davoren J, Abbott AL, Williams GV, Castner SA, Gray D. Characterization of PF-6142, a Novel, Non-Catecholamine Dopamine Receptor D1 Agonist, in Murine and Nonhuman Primate Models of Dopaminergic Activation. In: Nosheen Akhtar, editor. Updates in Pharmacology. ISBN: 978-93-90014-03-3. Hyderabad, India: Vide Leaf. 2020. (book chapter)
Flóra Z Fedor, Anita Zátonyi, Dorottya Cserpán, Zoltán Somogyvári, Zsolt Borhegyi, Gábor Juhász, Zoltán Fekete: Application of a flexible polymer microECoG array to map functional coherence in schizophrenia model Methods X, 101117 (journal paper)
Tamás Kiss, Stephen Morairty, Michael Schwartz, Thomas S. Kilduff, Derek L. Buhl, and Dmitri Volfson: Automated Sleep Stage Scoring Using k-Nearest Neighbors Classifier. Journal of Open Source Software, 5(53), 2377 (journal paper)
Bálint File, Tibor Nánási, Emília Tóth, Virág Bokodi, Brigitta Tóth, Boglárka Hajnal, Zsófia Kardos, László Entz, Loránd Erőss, István Ulbert and Dániel Fabó: Reorganization of Large-Scale Functional Networks During Low-Frequency Electrical Stimulation of the Cortical Surface International Journal of Neural Systems VOL. 30, NO. 03 (journal paper)
Ashaber, M., Zalányi, L., Pálfi, E., Stuber, I., Kovács, T., Roe, A. W., Friedman, R. M., & Négyessy, L.: Synaptic organization of cortico-cortical communication in primates. The European journal of neuroscience, Advance online publication, 2020, DOI: 10.1111/ejn.14905, PUBMED (journal paper)
Rouba Kozak, Tamás Kiss, Keith Dlugolenski, David E Johnson, Roxanne R Gorczyca, Kyle Kuszpit, Brian D Harvey, Polina Stolyar, Stacey Sukoff Rizzo, William E Hoffmann, Dmitri Volfson, Mihály Hajós, Jennifer E Davoren, Amanda L Abbott, Graham V Williams, Stacy A Castner and David L Gray: Characterization of PF-6142, a novel, non-catecholamine dopamine receptor D1 agonist, in murine and nonhuman primate models of dopaminergic activation. Frontiers in Pharmacology | Neuropharmacology, DOI: 10.3389/fphar.2020.01005 (journal paper)
Daniel Gero, Bálint File, Noreen Hinrichs, Matteo Mueller, István Ulbert, Zoltán Somogyvári, Marco Bueter: Mental and emotional representations of “weight loss”: free-word association networks in members of bariatric surgery-related social media communities, Surgery for Obesity and Related Issues, DOI:https://doi.org/10.1016/j.soard.2020.05.032 . (journal paper)
Zsigmond Benkő, Tamás Bábel, Zoltán Somogyvári: How to find a unicorn: a novel model-free, unsupervised anomaly detection method for time series arxiv:/2004.11468 . (abstract)

2019

P. Erdi: RANKING: The Unwritten Rules of the Social Game We All Play, Oxford University Press, 2019.
Zsigmond Benkő, Kinga Moldován, Katalin Szádeczky-Kardoss, László Zalányi, Sándor Borbély, Ildikó Világi, Zoltán Somogyvári: Causal relationship between local field potential and intrinsic optical signal in epileptiform activity in vitro Scientific Reports 9 Article number: 5171 (2019) (journal paper)
Hannu Reittu, Ilkka Norros, Tomi Räty, Marianna Bolla and Fülöp Bazsó : Regular decomposition of large graphs: foundation of a sampling approach to stochastic block model fitting. Data Science and Engineering 4 (1): pp. 44-60, 2019. https://doi.org/10.1007/s41019-019-0084-x (journal paper)
Daniel Gero, Balint File, Jörn Justiz, Robert E. Steinert, Lukas Frick, Alan C. Spectore, Marco Bueter: Drinking microstructure in humans: A proof of concept study of a novel drinkometer in healthy adults. Appetite, Volume 133, 1 February 2019, Pages 47-60, online 1 September, 2018, https://doi.org/10.1016/j.appet.2018.08.012 (journal paper)
Bálint File, Zsolt Keczer, Anna Vancsó, Beáta Bőthe, István Tóth-Király, Márton Hunyadi, Adrienn Ujhelyi, István Ulbert, Júlia Góth, Gábor Orosz: Emergence of polarized opinions from free association networks Behavior Research Methods February 2019, Volume 51, Issue 1, pp 280–294, https://doi.org/10.3758/s13428-018-1090-z (journal paper)
Géza B. Selmeczy, András Abonyi, Lothar Krienitz, Peter Kasprzak, Peter Casper, András Telcs, Zoltán Somogyvári, Judit Padisák: Old sins have long shadows: Climate change weakens efficiency of trophic coupling of phyto- and zooplankton in a deep oligo-mesotrophic lowland lake (Stechlin, Germany) – a causality analysis. Hydrobiologia 2019 v.831 no.1 pp. 101-117 DOI : 10.1007/s10750-018-3793 (journal paper)

2018

Zsigmond Benkő, Ádám Zlatniczki, Marcell Stippinger, Dániel Fabó, András Sólyom, Loránd Erőss, András Telcs, Zoltán Somogyvári: Complete Inference of Causal Relations between Dynamical Systems, arxiv:/1808.10806 . (abstract)
Orsolya Kántor, Gergely Szarka, Zsigmond Benkő, Zoltan Somogyvari, Emese Pálfi, Gábor Baksa, Gergely Rácz, Roland Nitschke, Gábor Debertin, Bela Volgy: Strategic Positioning of Connexin36 Gap Junctions Across Human Retinal Ganglion Cell Dendritic Arbors Frontiers in Cellular Neuroscience ID: 410573 (journal paper)
Zátonyi A, Borhegyi Z, Cserpán D , Somogyvári Z , Srivastava M ,Kisvárday Z and Fekete Z : Functional brain mapping using optical imaging of intrinsic signals and simultaneous high-resolution cortical electrophysiology with a flexible, transparent microelectrode array Sensors & Actuators: B. Chemical 273 (2018) 519–526 (journal paper)
Pálfi E, Zalányi L, Ashaber M, Palmer C, Kántor O, Roe AW, Friedman RM, Négyessy L.: Connectivity of neuronal populations within and between areas of primate somatosensory cortex. Brain Struct Funct. 2018 Jul;223(6):2949-2971. Epub 2018 May 3. doi:10.1007/s00429-018-1671-8. (journal paper)

2017

Cserpán D, Mészena D, Wittner L, Tóth K, Ulbert I, Somogyvári Z, Wójcik D: Revealing the Distribution of Transmembrane Currents along the Dendritic Tree of a Neuron with Known Morphology from Extracellular Recordings. eLife 2017;6:e29384 doi: 10.7554/eLife.29384 (journal paper)
Zátonyi A, Borhegyi Z, Cserpán D , Somogyvári Z , Srivastava M ,Kisvárday Z and Fekete Z : Optical Imaging of Intrinsic Neural Signals and Simultaneous MicroECoG Recording Using Polyimide Implants, Proceedings 2017, 1, 610; doi:10.3390/proceedings1040610 (journal paper)
Matsuzawa T, Zalányi L, Kiss T and Érdi P : Multi-scale modeling of altered synaptic plasticity related to Amyloid beta effects Neural Networks, 93 DOI10.1016/j.neunet.2017.06.002 (journal paper)
Somogyvári Z and Érdi P: From phase transitions to the topological renaissance: Comment on “Topdynamics of Metastable Brains” by Arturo Tozzi et al.> Physics of Life Reviews http://dx.doi.org/10.1016/j.plrev.2017.05.005 (journal paper)
Érdi P, Matsuzawa T, John T, Kiss T and Zalányi L: Connecting Epilepsy and Alzheimer’s Disease: Modeling of Normal and Pathological Rhythmicity and Synaptic Plasticity Related to Amyloidβ (Aβ) Effects. In: Érdi P, Bhattacharya BS and Cochran Al (Eds.): Computational Neurology and Psychiatry (Springer Series in Bio-/Neuroinformatics) 1st ed. 2017 Edition, pp 93-119. Springer. (book chapter)
Érdi P, Bhattacharya BS and Cochran Al (Eds.): Computational Neurology and Psychiatry (Springer Series in Bio-/Neuroinformatics) 1st ed. 2017 Edition, Springer. (book / anthology)
Zsigmond Benkő, Dániel Fabó, Zoltán Somogyvári: Time series and interactions: Data processing in Epilepsy research. Comoputational Neurology – Computational Psychiatry: Why and How. Eds: Péter Érdi, Basabdatta Sen Bhattacharya, Amy Cochran, Computational Neurology and Psychiatry (Springer Series in Bio-/Neuroinformatics) 1st ed. 2017 Edition, Springer. (book chapter)
Wadhwa RR, Zalányi L, Szente J, Négyessy L, Érdi P: Stochastic kinetics of the circular gene hypothesis: feedback effects and protein fluctuations. Mathematics and Computers in Simulation. 117: p. AiP. 133: pp. 326-336. (journal paper)
István Kecskés, Ervin Burkus, Fülöp Bazsó and Péter Odry: Model validation of a hexapod walker robot. Robotica. / Volume 35 / Issue 2 / pp. 419-462, February 2017 DOI: http://dx.doi.org/10.1017/S0263574715000673 (journal paper)

2016

Bruck P, Réthy I, Szente J, Tobochnik J and Érdi P Recognition of Emerging Technology Trends. Class-selective study of citations in the U.S. Patent Citation Network Scientometrics 107(1465-1475)2016 (journal paper)
Kamalaldin K, Salome A and Érdi P Modeling Ebola. Science Progress 99(200-219) (journal paper)
Zs. J. Viharos, D. Chetverikov, A. Háry, R. Sághegyi, A. Barta, L. Zalányi, I. Pomozi, Sz. Soós, Zs. Kövér, B. Varjú Vision based, statistical learning system for fault recognition in industrial assembly environment IEEE 21st International Conference on Emerging Technologies and Factory Automation (ETFA), Berlin, 2016, pp. 1-6. doi: 10.1109/ETFA.2016.7733730 (proceedings paper)
Somogyvári Zoltán, Zalányi László: Biofizika, Lélekenciklopédia II. 355-374. Szerk: Székely Attila. Gondolat. (book chapter in Hungarian)
Fekete Z, Pálfi E, Márton G, Handbauer M, Bérces Zs, Ulbert I, Pongrácz A, Négyessy L Combined in vivo recording of neural signals and iontophoretic injection of pathway tracers using a hollow silicon microelectrode SENSORS AND ACTUATORS B-CHEMICAL 236: pp. 815-824. (journal paper)
Pálfi E, Ashaber M, Palmer C, Friedman RM, Roe AW, Négyessy L Neuronal connections within the hand representation in areas 3b and 1 of the somatosensory cortex in primates ˇ”Neuronalis összeköttetések a szomatoszenzoros kérgi área 3b és área 1 kézreprezentációs területén foemlosökben” ORVOSI HETILAP 157:(33) pp. 1320-1325. (journal paper in Hungarian)
Somogyvári Z and Érdi P: Forward and Backward Modeling: From Single Cells to Neural Population and Back. In: Cognitive Phase Transitions in the Cerebral Cortex – Enhancing the Neuron Doctrine by Modeling Neural Fields. Eds:Robert Kozma and Walter J. Freeman, in Series: Studies in Systems, Decision and Control, Springer. (book chapter)
Bálint File, Zoltán Klimaj, Zoltán Somogyvári, Lajos R Kozák, Gyula Gyebnár, Brigitta Tóth, Zsófia Kardos, István Ulbert, Márk Molnár: Age-related changes of the representative modular structure in the brain IEEE International Workshop on Pattern Recognition in Neuroimaging (PRNI), 2016 DOI: 10.1109/PRNI.2016.7552346 (proceedings paper)
Kántor O, Mezey S, Adeghate J, Naumann A, Nitschke R, Énzsöly A, Szabó A, Lukáts Á, Németh J, Somogyvári Z, Völgyi B.: Calcium buffer proteins are specific markers of human retinal neurons. Cell Tissue Res. 2016 Jul;365(1):29-50. doi: 10.1007/s00441-016-2376-z. Epub 2016 Feb 22. (journal paper)
Scott L, Kiss T, Kawabe TT, Hajós M: Neuronal network activity in the hippocampus of tau transgenic (Tg4510) mice. Neurobiology of Aging.2016 Jan;37:66-73. (journal paper)

2015

Ujfalussy B, Makara J, Branco T, Lengyel M : Dendritic nonlinearities are tuned for efficient spike-based computations in cortical circuits eLIFE 2015;10.7554/eLife.10056
Fekete Z, Pálfi E, Márton G, Handbauer M, Bérces Zs, Ulbert I, Pongrácz A, Négyessy L.: In Vivo Iontophoretic BDA Injection through a Buried Microfluidic Channel of a Neural Multielectrode. PROCEDIA ENGINEERING 120: pp. 464-467.
Kapitány K, Négyessy L, Fonta C, Mokso R, Barsi Á, Szepessy Z: Automatic reconstruction of brain’s micro-vascular network based on x-ray synchrotron tomography. BIOMECHANICA HUNGARICA 8:(1) p. &. 8 p. (2015)
Kántor O, Cserpán D, Völgyi B, Lukáts A, Somogyvári Z: The Retinal TNAP. Subcell Biochem. 76:107-123. (journal paper)
Négyessy L, Györffy B, Hanics J, Bányai M, Fonta C, Bazsó F: Signal Transduction Pathways of TNAP: Molecular Network Analyses. Subcell Biochem. 76:185-205. (journal paper)
Fonta C, Barone P, Martinez LR, Négyessy L: Rediscovering TNAP in the Brain: A Major Role in Regulating the Function and Development of the Cerebral Cortex. Subcell Biochem. 76:85-106. (journal paper)
Fonta C, Négyessy L: Neuronal Tissue-Nonspecific Alkaline Phosphatase (TNAP). Subcellular Biochemistry 76. Springer Netherlands, Dordrecht (book / anthology)
Kántor O, Benkő Z, Énzsöly A, Dávid C, Naumann A, Nitschke R, Szabó A, Pálfi E, Orbán J, Nyitrai M, Németh J, Szél Á, Lukáts Á, Völgyi B: Characterization of Connexin36 Gap Junctions in the Human Outer Retina. Brain Structure and Function (journal paper)
Kántor O, Varga A, Tóth R, Énzsöly A, Pálfi E, Kovács-Öller T, Nitschke R, Szél Á, Völgyi B, Négyessy L, Somogyvári Z, Lukáts Á. The stratified organization and disorganization of the inner plexiform layer revealed by TNAP activity in healthy and diabetic rat retina. Cell Tissue Res., 2015 Feb;359(2):409-21. doi: 10.1007/s00441-014-2047-x. (journal paper)

2014

Érdi P and Bányai M Introduction to Cognitive Systems. In:Handbook on Computational Intelligence. Ed. Angelov, World Scientific (in press). (book chapter)
Érdi P. Lente G. Stochastic Chemical Kinetics – Theory and (Mostly) Systems Biological Applications Springer Series in Synergetics (monograph)
Kántor O, Varga A, Kovács-Öller T, Enzsöly A, Balogh L, Baksa G, Szepessy Z, Fonta C, Roe AW, Nitschke R, Szél A, Négyessy L, Völgyi B, Lukáts A. TNAP activity is localized at critical sites of retinal neurotransmission across various vertebrate species. Cell Tissue Res. , Oct; 358(1):85-98. doi:10.1007/s00441-014-1944-3. (journal paper)
Hannu Reittu, Fülöp Bazsó and Robert Weiss Regular Decomposition of Multivariate Time Series and Other Matrices, Structural, Syntactic, and Statistical Pattern Recognition, Lecture Notes in Computer Science , Volume 8621, 2014, pp 424-433 (proceedings paper, published as a book)
Gershenson C, Csermely P, Érdi P, Knyazeva H and Lászlo L The Past, Present and Future of Cybernetics and Systems Research, Systema, 1(3), pp. 4-13. (journal paper)
John T, Kiss T, Lever C and Érdi P Anxiolytic Drugs and Altered Hippocampal Theta Rhythms: The Quantitative Systems Pharmacological Approach, Network: Computation in Neural Systems, March–June, Vol. 25, No. 1-2 , Pages 20-37. (journal paper)
Jones BD, Zalányi L and Érdi P An Integrated Theory of Budgetary Politics and Some Empirical Tests: The US National Budget, 1791-2010, American Journal of Political Science, pp 1-18. DOI: 10.1111/ajps.12088 (journal paper)
Berényi A, Somogyvári Z, Nagy A, Roux L, Long J, Fujisawa S, Stark E, Leonardo A, Harris T and Buzsáki Gy Large-scale, high-density (up to 512 channels) recording of local circuits in behaving animals. Journal of Neurophysiology, 1 March, Vol. 111, no.5 1132-1149, doi:10.1152/jn.00785.2013 (journal paper)
Ashaber M, Pálfi E, Friedman RM, Palmer C, Jákli B, Chen LM, Kántor O, Roe AW, Négyessy L. Connectivity of somatosensory cortical area 1 form an anatomical substrate for the emergence of multifinger receptive fields and complex feature selectivity in the squirrel monkey (Saimiri sciureus). J Comp Neurol, (in press) PDF (journal paper)
Borbély S, Körössy Cs, Somogyvári Z, Világi I The in vitro intrinsic optical imaging can be used for source determination in cortical slices, European Journal of Neuroscience,39:(1) pp. 72-82 (journal paper)

2013

Z Wang, L M Chen, L Négyessy, R M Friedman, A Mishra, J C Gore, A W Roe The Relationship of Anatomical and Functional Connectivity to Resting-State Connectivity in Primate Somatosensory Cortex. Neuron, 78(6):1116-1126, 2013. A commentary about this paper by Olaf Sporns and Christopher Honey. (journal paper)
Kapitány K, Négyessy L, Barsi Á. Tomographic reconstruction of micro-vascular network in cerebral cortical samples. V. Magyar Biomechanika Konferencia, 2013 május 24-25. Budapest. (proceedings paper)
Érdi P, Makovi K, Somogyvári Z, Strandburg K, Tobochnik J, Volf P, Zalányi L Prediction of Emerging Technologies Based on Analysis of the U.S. Patent Citation Network, Scientometrics, April 2013, Volume 95, Issue 1, pp 225-242 , 2012 doi: 10.1007/s11192-012-0796-4. An article about this paper in New Scientist. (journal paper)
L Négyessy, E Pálfi, M Ashaber, C Palmer, B Jákli, R M Friedman, L M Chen, A W Roe Intrinsic horizontal connections process global tactile features in the primary somatosensory cortex: Neuroanatomical evidence. Journal of Comparative Neurology, accepted for publication, 2013. doi:10.1002/cne.23317 (journal paper)
X Descombes, G Malandain, C Fonta, L Négyessy, R Mosko Automatic dendrite spines detection from X-ray tomography volumes. IEEE ISBI, accepted for publication, 2013. (journal paper)

2012

Bányai M Az agyműködés hálózatai (Functional networks of the brain, in hungarian), Természet Világa 143(11):505-507, 2012. (journal paper in Hungarian)
G Mijatovic, T Loncar-Turukalo, L Négyessy, F Bazsó, E Procyk, L Zalányi, J Minich, D Bajic Explicit Markov counting model of inter-spike interval time series, 10th International Symposium on Intelligent Systems and Informatics, 20-22 September 2012, Subotica, Serbia. doi: 10.1109/SISY.2012.6339535 (proceedings paper)
T Loncar-Turukalo, L Négyessy, E Procyk, D Bajic Multifractal detrended fluctuation analysis and local scale exponents of inter spike intervals, 10th International Symposium on Intelligent Systems and Informatics, 20-22 September 2012, Subotica, Serbia. doi: 10.1109/SISY.2012.6339577 (proceedings paper)
L Négyessy, J Minich, D Meszéna, A Buzás, B Jákli, M Bányai, E Procyk, P Barone and F Bazsó From neuronal communication to the flow of information in the cerebral cortex, 9th Conference Digital Speech and Image Processing, 4-7 October 2012, Kovacica, Serbia (proceedings paper)
D Lendvai, M Morawski, L Négyessy, G Gáti, G Baksa, T Glasz, J Attems, C Jager, H Tanila, T Arendt, T Harkány, A Alpár Neurochemical mapping of the human hippocampus reveals perisynaptic matrix around functional synapses in Alzheimer’s disease, Acta Neuropathologica, 2012. (accepted) doi:10.1007/s00401-012-1042-0 (journal paper)
Somogyvári Z, Cserpán D, Ulbert I, Érdi P Localization of single cell current sources based on extracellular potentials patterns: the spike CSD method, European Journal of Neuroscience, Volume 36, Issue 10, pages 3299–3313, November 2012. Also see the cover page January 2013 Volume 37, Issue 1 (journal paper)
Hanics J, Barna J, Xiao J, Millán JL, Fonta C, Négyessy L. Ablation of TNAP function compromises myelination and synaptogenesis in the mouse brain.Cell Tissue Res., accepted for publication, 2012. (journal paper)
Négyessy, L, Bányai, M, Bazsó F What makes the prefrontal cortex so appealing in the era of brain imaging? A network analytical perspective. ACTA BIOLOGICA HUNGARICA, 63(S1):38-53, 2012. doi:10.1556/ABiol.63.2012.Suppl.1.5 (journal paper)
Bozanić N, Lončar Turukalo T, Négyessy L, Bazsó F, Procyk E, Bajić D , REMOVAL OF ACTION POTENTIAL INFLUENCE ON LOCAL FIELD POTENTIALS USING EMPIRICAL MODE DECOMPOSITION, 7th International Workshop on Biosignal Interpretation, 2-4 July 2012, Como, Italy (proceedings paper)

2011

Somogyvári Z, Cserpán D, Ulbert I, Érdi P Micro-Electric Imaging: Inverse Solution for Localization of Single Neuron Currents Based on Extracellular Potential Measurements Science Beyond Fiction, FET’11 The European Future Technologies Conference and Exibition, Procedia Computer Science, Volume 7, Pages 348-350, 2011 (proceedings paper, published in a journal)
Lončar-Turukalo T, Minich J, Bányai M, Bazsó F, Odry P, Négyessy L, Bajić D On Ramp Statisics in ISI Time Series 5th European Conference of the International Federation for Medical and Biological Engineering, Budapest, 14-18 September, 2011 (proceedings paper)
Bányai M, Ujfalussy B, Diwadkar V and Érdi P Impairments in the prefronto-hippocampal interactions explain associative learning deficit in schizophrenia. BMC Neuroscience 12(Suppl 1):93, 2011. doi:10.1186/1471-2202-12-S1-P93 (proceedings paper)
Érdi P, Bányai M, Ujfalussy B, Diwadkar V. The schizophrenic brain: A broken hermeneutic circle. Some new insights and results. The 2011 International Joint Conference on Neural Networks (IJCNN), 2011. San José, CA, USA 3024 – 3027, 2011. doi:10.1109/IJCNN.2011.6033619 (proceedings paper)
Ujfalussy B, Lengyel M Active dendrites: adaptation to spike-based communication Advances in Neural Information Processing Systems (accepted) (proceedings paper)
Érdi P. review on Cutsuridis et al. (eds): Perception–action cycle. Models, architectures, and hardware Cognitive Neurodynamics (in press) (journal paper)
Bányai M, Diwadkar V, Érdi P. Model-based dynamical analysis of functional disconnection in schizophrenia. NeuroImage 58(3): 870-877, 2011. doi:10.1016/j.neuroimage.2011.06.046 (journal paper)
Bányai, M., Négyessy, L., Bazsó F., Organisation of signal flow in directed networks. Journal of Statistical Mechanics: theory and experiment, P06001, 2011. doi: 10.1088/1742-5468/2011/06/P06001 (journal paper)
Berkes P, Orbán G, Lengyel M, Fiser J. Spontaneous Cortical Activity Reveals Hallmarks of an Optimal Internal Model of the Environment. Science, 331(6013) 83-87 (journal paper)
Érdi P. Towards a Post-Keplerian social science: Comments by P. Érdi on the Visioneer white papers by D. Helbing and S. Balietti European Physical Journal, Special Topics, 195:147-151, 2011. (journal paper)

2010

Dollé, L.; Sheynikhovich, D.; Girard, B.; Ujfalussy, B.; Chavarriaga, R. and Guillot, A. Analyzing interactions between cue-guided and place-based navigation with a computational model of action selection: Influence of sensory cues and training. Meyer, J.-A; et al. (Eds.) LNAI – Simulation of Adaptive Behavior 6226, 335-346, Springer-Verlag (proceedings paper)
Zoltan Pap, István Kecskés, Ervin Burkus, F. Bazsó, Péter Odry Optimization of the Hexapod Robot Walking by Genetic Algorithm, 8-th IEEE International Symposium on Intelligent Systems and Informatics. SISY 2010. September 10-11, 2010, Subotica, Serbia. (proceedings paper)
B. Ujfalussy. Idegsejtek Biofizikája Természet Világa 141(9): 417-18; 141(10): 466-68 (journal paper in Hungarian)
P. Érdi. Scope and Limits of Predictions by Social Dynamic Models: Crisis, Innovation, Decision Making. Evolutionary and Institutional Economics Review, 7(1): 21-42 (journal paper)
CD Gore, M Bányai, PM Gray, V Diwadkar, P Érdi. Pathological Effects of Cortical Architecture on Working Memory in Schizophrenia. Pharmacopsychiatry 43(Suppl 1)592-597 (journal paper)
J. Fiser, P. Berkes, G. Orbán, M. Lengyel. Statistically optimal perception and learning: from behavior to neural representations. Trends in Cognitive Sciences, 14(3) 119-130 (journal paper)
P. Érdi, T. Kiss and B. Ujfalussy. Multi-level Models. in Hippocampal Microcircuits., eds.: V. Cutsuridis; B. Graham; S. Cobb; I. Vida. Springer-Verlag pp. 527-554 (book chapter)

2009

Vilagi I, Borbely S, Korossy Cs, Somogyvari Z Cortical Region and Layer Specific Activation During Epileptiform Seizure EPILEPSIA 2009, 50:83-84 (journal paper)
Huhn Z, Szirtes G, Lorincz A, Csépe V. Perception based method for the investigation of audiovisual integration of speech. Neurosci Lett. 2009 Nov 20;465(3):204-9. Epub 2009 Sep 3. (journal paper)
Jones BD, Zalányi L, Baumgartner F and Érdi P Dynamic Threshold Modeling of Budget Changes. Proc. AAAI Fall Symp.; Complex Adaptive Systems and the Threshold Effect: Views from the Natural and Social Sciences, AAA Press, pp. 61-66. (proceedings paper)
Drutchas G and Érdi P Dynamics of Price Sensitivity and Market Structure in an Evolutionary Economic Matching Model. In Proc. AAAI Fall Symp.; Complex Adaptive Systems and the Threshold Effect: Views from the Natural and Social Sciences, AAA Press, pp 39-46. (proceedings paper)
M. Bányai, T. Nepusz, L. Négyessy, F. Bazsó Convergence properties of some random networks, 7-th International Symposium on Intelligent Systems and Informatics 241-245, DOI: 10.1109/SISY.2009.5291157 , 2009. SISY 2009. Subotica, Serbia. (proceedings paper)
P. Érdi, B. Ujfalussy, V. Diwadkar: The schizophrenic brain: A broken hermeneutic circle Neural Network World 19(5):413-427 (journal paper)
B. Ujfalussy, T Kiss, P. Érdi: Parallel Computational Subunits in Dentate Granule Cells Generate Multiple Place Fields PLoS Comput Biol 5(9):e1000500. (journal paper)
Prosperi MC, Altmann A, Rosen-Zvi M, Aharoni E, Borgulya G, Bazso F, Sànnerborg A, Schülter E, Struck D, Ulivi G, Vandamme AM, Vercauteren J, Zazzi M; EuResist and Virolab study groups: Investigation of expert rule bases, logistic regression, and non-linear machine learning techniques for predicting response to antiretroviral treatment Antiviral Therapy 14(3):433-42. (journal paper)
Zsófia Huhn, Zoltán Somogyvári, Tamás Kiss, Péter Érdi: Distance Coding Strategies based on the Entorhinal Grid Cell System Neural Networks 22(5-6): 536-543 (journal paper)
K J. Strandburg, G Csardi, J Tobochnik, P Érdi, and L Zalanyi Patent citation networks revisited: signs of a twenty-first century change? North Carolina Law Review 87(5):1657-1698 (journal paper)
D. Samu, P. Erős, B. Ujfalussy, T Kiss: Robust path integration in the entorhinal grid cell system with hippocampal feed-back. Biological Cybernetics 101(1):19-34 (journal paper)
C. Fox, M. Humphries, B. Mitchinson, T. Kiss, Z. Somogyvári, T. Prescott: Technical integration of hippocampus, basal ganglia and physical models for spatial navigation. Frontiers in Neuroinformatics (journal paper)
Minich J, Négyessy L, Procyk E, Barone P, Odry P and Bazsó F Statistical and stochastical properties of inter spike interval time series. Frontiers in Systems Neuroscience. Conference Abstract: 12-th Meeting of the Hungarian Neuroscience Society. doi: 10.3389/conf.neuro.01.2009.04.213 (other)

2008

Minich J., Négyessy L., Barone P., Procyk E., Zalányi L. and Bazsó, F. Statistical method for determination of interspike interval probability density function 6-th International Symposium on Intelligent Systems and Informatics, 2008. SISY 2008. Subotica, Serbia. ISBN: 978-1-4244-2406-1, INSPEC Accession Number: 10384697, Digital Object Identifier: 10.1109/SISY.2008.4664907 (proceedings paper)
VA Diwadkar, B Flaugher, T Jones, Zalányi L, Ujfalussy B, MS Keshavan, Érdi P.Impaired associative learning in schizophrenia: Behavioral and computational studies. Cognitive Neurodynamics 2(3):207-219 (2008) (journal paper)
K. Szalisznyó, L. Müller: Dopamine induced switch in the subthreshold dynamics of the striatal cholinergic interneurons: a numerical study. Journal of Theoretical Biology, 2009; 256(4):547-60. (journal paper)
Négyessy L, Nepusz T, Zalányi L, Bazsó F.: Convergence and divergence are mostly reciprocated properties of the connections in the network of cortical areas. Proceedings of the Royal Society B, 275:2403-2410 (2008); doi:10.1098/rspb.2008.0629 (journal paper)
Péter Érdi, Vaibhav Diwadkar, Balázs Ujfalussy: The Schizophrenic Brain: A broken hermeneutic circle. In: Vera Kurkova Roman Neruda, Jan Koutnik (Eds.): Artificial Neural Networks – ICANN 2008, 18th International Conference, Prague, Czech Republic, September 3-6, 2008, Proceedings, Part II. Lecture Notes in Computer Science 5164 Springer 2008, pp. 929-938 (abstract)
Petróczi A., EV Aidman, and Nepusz T.: Capturing doping attitudes by self-report declarations and implicit assessment: a methodology study. Substance Abuse Treatment, Prevention, and Policy 3(9), doi:10.1186/1747-597X-3-9 (journal paper)
Érdi P., Ujfalussy B., Zalányi L., V A Diwadkar: Computational approach to schizophrenia: Disconnection syndrome and dynamical pharmacology. In A selection of papers of The BIOCOMP 2007 International Conference L. M. Ricciardi (ed.) Proceedings of the American Institute of Physics 1028, 65-87 (proceedings paper)
Ujfalussy B., Erős P., Somogyvári Z., Kiss T.: Episodes in space: A modelling study of hippocampal place representation M. Asada et al (Eds): SAB 2008, LNAI 5040, pp. 123-136, Springer-Verlag Berlin Heidelberg, 2008. (proceedings paper)
Ujfalussy B., Kiss T. and Érdi P.: Independence of the granule cell’s dendritic branches leads to multiple place fields in the dentate gyrus, Proceedings of the 5th Cosyne, p213, Salt Lake City, Utah, 2008 (abstract)
Ulbert I., Érdi P. and Somogyvári Z.: Spatio-temporal spike dynamics: Localization of single cell currents based on extracellular potentials patterns. Proceedings of the 5th Cosyne, p214, Salt Lake City, Utah, 2008 (abstract)
Nepusz T., Négyessy L., Tusnády G., Bazsó F.: Reconstructing cortical networks: case of directed graphs with high level of reciprocity. Chapter 8 in Handbook of Large-Scale Random Networks, eds.: Béla Bollobás, Róbert Kozma, Dezső Miklós. Springer-Verlag (book chapter)
Csárdi G, KJ Strandburg, J Tobochnik, Érdi P.: The inverse problem of evolving networks – with application to social nets. Chapter 10 in Handbook of Large-Scale Random Networks, eds.: Béla Bollobás, Róbert Kozma, Dezső Miklós. Springer-Verlag (book chapter)
Nepusz T, Petróczi A, Négyessy L, Bazsó F.: Fuzzy communities and the concept of bridgeness in complex networks. Physical Review E, 77:016107, 2008. (journal paper)

2007

Szalisznyó K, Longtin A, Maler L.: Effect of synaptic plasticity on sensory coding and steady-state filtering properties in the electric sense. Biosystems 92(1):16-28. (2008) (journal paper)
Nepusz T, Bazsó F: Maximum likelihood methods for data mining in datasets represented by graphs. Proceedings of the IEEE 5th International Symposium on Intelligent Systems and Informatics, pp. 161-165. (proceedings paper)
Érdi P.: Complexity explained. Springer, 2007 (monograph)
Nepusz T, Bazsó F: Likelihood-based clustering of directed graphs. Proceedings of the IEEE 3rd International Symposium on Computational Intelligence and Intelligent Informatics, pp. 189-194. (proceedings paper)
Csárdi G, Strandburg KJ, Zalányi L, Tobochnik J, Érdi P: Modeling innovation by a kinetic description of the patent citation system Physica A: Statistical and Theoretical Physics 374(1-2) (2007) 783-793 (journal paper)
Ujfalussy B, Kiss T, Orbán G, WE Hoffmann, Érdi P, Hajós M: Pharmacological and Computational Analysis of alpha-subunit Preferential GABAA Positive Allosteric Modulators on the Rat Septo-Hippocampal Activity. Neuropharmacology 52(3) (2007) 733-743 (journal paper)

2006

Strandburg KJ, Csárdi G, Tobochnik J, Érdi P, Zalányi L: Law and the Science of Networks: an Overview and an Application to the “Patent Explosion”, Berkeley Technology Law Journal, 21(4) (2006) 1293-1362 (journal paper)
Csárdi G: Dynamics of citation networks, Proceedings of the International Conference on Artificial Neural Networks, Lecture Notes in Computer Science, 698-709 (2006) (proceedings paper, published as a book)
Csárdi G, Strandburg KJ, Zalányi L, Tobochnik J, Érdi P: Estimating the dynamics of kernel-based evolving networks, Proceedings of the International conference on Complex Systems (2006) (proceedings paper)
Csárdi G, Nepusz T: The igraph software package for complex network research, Proceedings of the International Conference on Complex Systems (2006) (proceedings paper)
Borbély S, Halasy K, Somogyvári Z, Détári L, Világi I.: Laminar analysis of initiation and spread of epileptiform discharges in three in vitro models. Brain Research Bulletin 69 (2) (2006) 161-167 (journal paper)
Petróczi A, Nepusz T, Bazsó F: Measuring tie-strength in virtual social networks Connections 27(2) (2006) 49-57 (journal paper)
Orbán G, Kiss T and Érdi P.: Intrinsic and synaptic mechanisms determining the timing of neuron population activity during hippocampal theta oscillation. Journal of Neurophysiology 96(6) (2006) 2889-2904 (journal paper)
Ujfalussy B and Kiss T: How do glutamatergic and GABAergic cells contribute to synchronization in the medial septum? Journal of Computational Neuroscience 21(3) (2006) 343-357 (journal paper)
Bazsó F and Lábos E: Boolean-Lie Algebras and the Leibniz rule. Journal of Physics A: Mathematical and General. 39 (2006) 6871-6876, doi:10.1088/0305-4470/39/22/005 (journal paper)
Érdi P, Kiss T, Tóth J, Ujfalussy B and Zalányi L: From systems biology to dynamical neuropharmacology: Proposal for a new methodology. IEE Proceedings in Systems Biology 153(4) (2006) 299-308 (journal paper)
Négyessy L, Nepusz T, Kocsis L and Bazsó F: Prediction of the main cortical areas and connections involved in the tactile function of the visual cortex by network analysis. European Journal of Neuroscience 23(7) (2006) 1919-1930. (journal paper)
Aradi I and Érdi P: Computational neuropharmacology: dynamical approaches in drug discovery. Trends in Pharmacological Sciences 27(5) (2006) 240-243 (journal paper)
Kiss T and Érdi P: From electric patterns to drugs: perspectives of computational neuroscience in drug design. BioSystems 86(1-3) (2006) 46-52 (journal paper)
Kiss T, Orbán G and Érdi P: Modelling hippocampal theta oscillation: applications in neuropharmacology and robot navigation. International Journal of Intelligent Systems 21(9) (2006) 903-917 (journal paper)
Szalisznyó K, Longtin, A and Maler, L: Altered sensory filtering and coding properties by synaptic dynamics in the electric sense. Neurocomputing 69(10-12) (2006) 1070-1075 (journal paper)
Szalisznyó K: Role of hyperpolarization-activated conductances in the lateral superior olive: a modeling study Journal of Computational Neuroscience 20(2) (2006) 137-152, DOI: 10.1007/s10827-005-5637-5 (journal paper)

2005

Érdi P and Tóth J: Towards a dynamic neuropharmacology: Integrating network and receptor levels. In: Brain, Vision and Artifical Intelligence. M. De Gregorio, V. Di Maio, M. Frucci and C. Musio (eds). Lecture Notes in Computer Science 3704, Springer, Berlin Heidelberg 2005, pp. 1-14. (book chapter)
Huhn Zs, Orbán G, Érdi P and Lengyel M: Theta oscillation-coupled dendritic spiking integrates inputs on a long time scale Hippocampus 15(7) (2005) 950-962 (journal paper)
Érdi P, Huhn Zs and Kiss T: Hippocampal theta rhythms from a computational perspective: code generation, mood regulation and navigation Neural Networks 18(9) (2005) 1202-1211 (journal paper)
Somogyvári Z, Zalányi L, Ulbert I and Érdi P: Model-based source localization of extracellular action potentials. Journal of Neuroscience Methods 147(2) (2005) 126-137 (journal paper)
Érdi P: Nonlinear Spatio-temporal Neural Dynamics – Experiments and Theoretical Model. Editorial Biological Cybernetics 92 (2005) 349-349 (journal paper)
Lengyel M, Huhn Zs and Érdi P Computational theories on the function of theta oscillation. Biological Cybernetics 92 (2005) 393-408 (journal paper)
Huhn Zs, Lengyel M, Orbán G and Érdi P: Dendritic spiking account for rate and phase coding in a biophysical model of a hippocampal cell. Neurocomputing 65-66 (2005) 331-341 (journal paper)

2004

Bazsó F, Petróczi A, Zalányi L: Accuracy of Joint Entropy and Mutual Information Estimates. Proceedings. 2004 IEEE International Joint Conference on Neural Networks 4 (2004) 2843- 2846 (proceedings paper)
Szalisznyó K, Zalányi L: Role of hyperpolarization-activated conductances in the auditory brainstem Neurocomputing 58-60 (2004) 401-407 (journal paper)
Kozma R, WJ Freeman, D Wong, Érdi P: Learning environmental clues in the KIV model of the cortico-hippocampal formation Neurocomputing 58-60 (2004) 721-728 (journal paper)
Papp G, Huhn Zs, Lengyel M, Érdi P: Effect of dendritic location and different components of LTP expression on the bursting activity of hippocampal CA1 pyramidal cells Neurocomputing 58-60 (2004) 691-697 (journal paper)
Hajós M, WE Hoffmann, Orbán G, Kiss T, Érdi P: Modulation of septo-hippocampal theta activity by GABAA receptors: Experimental and computational approach Neuroscience 126/3 (2004) 599-610 (journal paper)
Huhn Zs, Lengyel M, Érdi P: Rate and phase coing in a biophysical model of a hippocampal place cell Cybernetics and System Research: 2004 (ed. Trappl R), Austrian Society for Cybernetic Studies, Vienna, (193-198) 2004 (proceedings paper)
Lengyel M, Érdi P: Theta modulated feed-forward network generates rate and phase coded firing in the entorhino-hippocampal system IEEE Transactions on Neural Networks 15 (2004) 1092-1099 (journal paper)
Kocsis L, Négyessy L. and Bazsó F: Visuo-tactile cortical network defined on graph-theoretical ground 27th European Conference on Visual Perception, 2004 Budapest. Perception. 33(Suppl.), 143. (proceedings paper)
Négyessy L, Bazsó F and Kocsis L: Visuo-tactile cortical network defined on graph-theoretic ground MITT Conference, and IBRO International Workshop Budapest, 2004 Clinical Neuroscience 57(S1), 50. (proceedings paper)

2003

Orbán G, Kiss T, WE Hoffmann, Érdi P, Hajós M Modulation of Septo-hippocampal Theta Oscillation by GABAA Receptors: an Experimental and Computational Approach Program No. 679.11. 2003 Abstract Viewer/Itinerary Planner. Washington, DC: Society for Neuroscience, 2003. Online (abstract)
Érdi P: Neurobiológia És informatika Magyar Tudomány 2003 december (journal paper in Hungarian)
Zalányi L, Csárdi G, Kiss T, Lengyel M, Warner R, Tobochnik J, Érdi P: Properties of a random attachment growing network Physical Review E 68 066104 (2003) (journal paper)
Lengyel M, Szatmáry Z, Érdi P: Dynamically detuned oscillations account for the coupled rate and temporal code of place cell firing. Hippocampus 13 (2003) 700-714 (journal paper)
Bazsó F, Zalányi L, Csárdi G: Channel Noise in Hodgkin-Huxley Model Neurons. Physics Letters A, 311/1 (2003) 13-20 (journal paper)
Érdi P, Lengyel M: Matematikai modellek az idegrendszer-kutatásban. Kognitív idegtudomány (Eds. PlÉh Cs, Kovács Gy, Gulyás B), Osiris: Budapest, pp. 126-148 (book chapter in Hungarian)
Földy Cs, Somogyvári Z, Érdi P: Hierarchically Organized Minority Games. Physica A, 323 (2003) 735-742 (journal paper)
Kozma R, Freeman WJ, Érdi P: The KIV Model – Nonlinear Spatio-Temporal Dynamics of the Primordial Vertberate Forebrain. Neurocomputing, 52-54 (2003) 819-826 (journal paper)

2002

Érdi P, Somogyvári Z: Post-Hebbian Learning Algorithms. The Handbook of Brain Theory and Neural Networks, Second edition, (M.A. Arbib, Ed.), The MIT Press, Cambridge, MA. pp. 533-539 (book chapter)
Érdi P, Szalisznyó K: Hippocampal Rhythm Generation. The Handbook of Brain Theory and Neural Networks, Second edition, (M.A. Arbib, Ed.), The MIT Press, Cambridge, MA. pp. 898–901 (book chapter)
Kiss T, Érdi P: Mesoscopic Neurodynamics. BioSystems, Michael Conrad’s special issue, 64/1-3 (2002) 119-126 (journal paper)
Érdi P, Tsuda I: Hermeneutic Approach to the Brain: Process versus Device? Theoria et Historia Scientiarum Vol 6. 307-321, 2002 (journal paper)

2001

Érdi P: How to construct a brain theory? Behavioral and Brain Sciences 24 (2001) 815 (journal paper)
Misják F, Lengyel M, Érdi P: Episodic memory and cognitive map in a rate model network of the rat hippocampus. ICANN 2001 (Eds. Dorffner G, Bischof H, Hornik K), Springer Berlin 1135-1140 (proceedings paper)
Somogyvári Z, Barna B, Szász A, Szente M, Érdi P: Slow dynamics of epileptic seizure: analysis and model. Neurocomputing 38-40 (2001) 921-926 (journal paper)
Kiss T, Orbán G, Lengyel M, Érdi P: Intrahippocampal gamma and theta rhythm generation in a network model of inhibitory interneurons. Neurocomputing 38-40 (2001) 713-719 (journal paper)
Zalányi L, Bazsó F, Érdi P: The effect of synaptic depression on stochastic resonance. Neurocomputing 38-40 (2001) 459-465 (journal paper)
Orbán G, Kiss T, Lengyel M, Érdi P: Hippocampal rhythm generation: gamma related theta frequency resonance. Biological Cybernetics 84 (2001) 123-132 (journal paper)

2000

Szalisznyó K, Érdi P: Depolarizing/hyperpolarizing effects of GABAA synapse have beneficial role in synaptic weight resetting in hippocampus. Neuroreport 11 (2000) 3559-64 (journal paper)
Somogyvári Z, Payrits Sz: Length of State Cycles of Random Boolean Networks: an Analytic Study. Journal of Physics A: Mathematical and General 33 (2000) 6699-6706 (journal paper)
Payrits Sz, Zalányi L, Érdi P: Use of Paralell Computers in Neurocomputing. Recent Advances in PVM and MPI (Eds. J. Dongarra, P. Kacsuk, N. Podhorszki), Lect. Notes in Computer S&ci. Springer Verlag (2000) 313-321 (proceedings paper, published as a book)
Érdi P, Kiss T: The Complexity of the Brain: Structural, Functional and Dynamic Modules. Emergent Neural Computational Architectures based on Neuroscience, (Eds. S. Wermter, J. Austin, D. Willshaw), Springer Heidelberg (book chapter)
Arbib M, Érdi P: Structure, Function, and Dynamics: An Integrated Approach to Neural Organization. Behavioral and Brain Sciences 23(513-571) (journal paper)
Szalisznyó K, Érdi P: Effects of Granule Cell Firing Properties on the Temporal Pattern of the CA3 Pyramidal Cell’s Firing. Neurocomputing 32-33 (553-561) 2000 (journal paper)
Bazsó F: Derivation of Vector-Valued Boolean Functions. Acta Mathematica Hungarica 87 (197-203) 2000 (journal paper)
Érdi P: On the ‘Dynamic Brain’ Metaphor. Brain and Mind 1(119-145) 2000 (journal paper)
Érdi P: Az agy dinamikája. Pannonhalmi szemle VIII/2 (60-68) 2000 (journal paper in Hungarian)
Szalisznyó K, Érdi P: Statistical analysis of the hippocampal mossy-fiber projection’s effect. Cybernetics and System Research: 2000 (ed. Trappl R), Austrian Society for Cybernetic Studies, Vienna, (336-340) 2000 (proceedings paper)
Kiss T, Orbán G, Lengyel M, Érdi P: Hippocampal rhythm generation: gamma related theta frequency resonance. Cybernetics and System Research: 2000 (ed. Trappl R), Austrian Society for Cybernetic Studies, Vienna, (330-335) 2000 (proceedings paper)

1999

Lengyel M, Szatmári Z, Érdi P: A detuned oscillator model of place unit phase precession in the rat hippocampus. Society for Neuroscience Abstracts. volume 25, Part 2, page 1387. 1999 (abstract)
Bazsó F, Kepecs Á, Lengyel M, Payrits Sz, Szalisznyó K, Zalányi L, Érdi P: Single cell and population activities in cortical-like systems. Reviews in the Neurosciences 10 (201-212) 1999 (journal paper)
Lengyel M, Kepecs Á, Érdi P: Location-dependent differences between somatic and dendritic IPSPs. Neurocomputing 26-27 (193-197) 1999 (journal paper)
Érdi P, Aradi I: The Brain as a hermeneutic device. Hermeneutics and Science. Boston Studies in the Philosophy of Science, Vol. 206, (Eds. M. FehÉr, O. Kiss and L. Ropolyi),Kluwer Acad. Publ Dordrecht-Boston-London. pp. 183-198. (book chapter)
Adorján P, Barna G, Érdi P, Obermayer K: A statistical neuralfield approach to orientation selectivity.Neurocomputing 26-27 (313-318) 1999 (journal paper)
Bazsó F, Szalisznyó K, Payrits Sz, Érdi P: A statistical approach to neural population dynamics: theory, algorithms, simulations. Neurocomputing 26-27 (329-334) 1999 (journal paper)
Érdi P: Computational approach to the functional organization of the hippocampus. Neuronal bases and pscychological aspects of consciousness (ed. Taddei-Ferrati C), World Scientific, (72-84) (book chapter)
Érdi P: Neural and mental development: selectionsim, constructivism, hermeneutics. Neuronal bases and pscychological aspects of consciousness (ed. Taddei-Ferrati, C), World Scientific, (507-518) (book chapter)

1998

Bazsó F: Model of immunosuppression based on differential delay equations. Acta Chemia Hungarica – Models in Chemistry, 135 (247-256) 1998 (journal paper)
Érdi P: Structure-based modeling of schemas. Artificial Intelligence, 101 (341-343) 1998 (other)
Grőbler T, Barna G, Érdi P: Statistical model of the hippocampal CA3 region I. The single-cell module: bursting model of the pyramidal Cell. Biol. Cybernetics, 79 (301-308) 1998 (journal paper)
Barna G, Grőbler T, Érdi P: Statistical model of the hippocampal CA3 region II. The population framework: model of rhythmic activity in the CA3 slice. Biol. Cybernetics, 79 (309-321) 1998 (journal paper)
Érdi P, Aradi I, Kato Y, Yoshikawa, K: Dynamic information processing in natural and artificial olfactory systems. BioSytems, 46 (107-112) 1998 (journal paper)
Somogyvári Z, Andai A, Székely G, Érdi P: On the role of self-excitation in the developement of topographic order in the visual system of the frog. BioSystems, 48 (215-222) 1998 (journal paper)
Somogyvári Z, Andai A, Székely G, Érdi P: A self-organizing model of the ontogeny of the frog’s visual system:the generation of the anisotropy. Cybernetics and System Research: 98 (ed. Trappl R), Austrian Society for Cybernetic Studies, Vienna, (317-322) 1998 (proceedings paper)
Érdi P: A Statistical Aproach to Neural Population Dynamics: Theory, Algorithms. Simulations. Eur. J. Neurosci 10, Suppl.10 (37) 1998 (abstract)
Szatmáry Z, Lengyel M, Érdi P, Obermayer K: Using temporal associatons to model the development of place fields in a novel environment. Eur. J. Neurosci 10, Suppl.10 (39) 1998 (abstract)
Érdi P, Kepecs Á, Lengyel M, Obermayer K, Szatmáry Z: Dynamics of the Hippocampus: Multiple Strategies. International Conference on Neural Information Processing, Kitakyushu, (777-780) 1998 (proceedings paper)
Érdi P: A kísÉrleti episztemológia nagy kísÉrlete: A McCulloch centenárium elÉ. Magyar Pszichológiai Szemle, 37 (59-68) 1997-98 (journal paper in Hungarian)
Bazsó F: Logika, dinamika, neurodinamika. Magyar Pszichológiai Szemle, 37 (233-241) 1997-98 (journal paper in Hungarian)
Bazsó F: Mathematical modell for immunosupressive effect of dopamine. Neurobiology, 6 (168) 1998 (abstract)
Érdi P: Idegrendszeri modellek. Új Alaplap, 16 (61-63) 1998 (journal paper in Hungarian)

1997

Arbib MA, Érdi P, Szentágothai J: Neural Organization: Structure, Function and Dynamics. MIT Press, 1997 (monograph)
Érdi P, Aradi I, Grőbler T: Rhythmogenesis in single cells and population models: olfactory bulb and hippocampus. BioSystems, 40 (45-53) 1997 (journal paper)
Grőbler T, Barna G: Single cell and population activity in a statistical model of the hippocampal CA3 region. Computational Neuroscience: Trends in Research (ed. Bower JM), Plenum, New York, (327-331) 1997 (proceedings paper, published as a book)
Bazsó F, Lábos E: Differentiable Boolean dynamics is possible and useful for studying neural network behaviour. Neurobiology, 5 (263-266) 1997 (journal paper in Hungarian)

1996

Érdi P: Levels, models, and brain activities: neurodynamics is pluralistic. Behavioral and Brain Sciences, 19 (296-297) 1996 (journal paper)
Érdi P: The brain as a hermeneutic device. BioSystems, 38 (79-89) 1996 (journal paper)
Érdi P: The complexity of the brain: structure, function, dynamics. Brain Processes, Theories and Models (ed. Moreno-Diaz R, Mira-Mira J), MIT Press, Cambridge (88-97) 1996 (book chapter)
Aradi I, Érdi P: Signal generation and propagation in the olfactory bulb: multicompartmental modeling. Computers and Mathematics with Applications, 32 (1-27) 1996 (journal paper)
Aradi I, Érdi P: Multicompartmental modeling of neural circuits in the olfactory bulb. Cybernetics and Systems, 27 (605-615) 1996 (journal paper)
Grőbler T, Barna G: A statistical model of the CA3 region of the hippocampus. Cybernetics and Systems ’96 (ed. Trappl R), Austrian Society for Cybernetic Studies, Vienna, (503-507) 1996 (proceedings paper)
Bazsó F, Lábos E: Towards a differentiable Boolean dynamics. Cybernetics and Systems ’96 (ed. Trappl R), Austrian Society for Cybernetic Studies, Vienna, (14-19) 1996 (proceedings paper)
Aradi I, Érdi P: Multicompartmental modeling of the olfactory bulb. Cybernetics and Systems ’96 (ed. Trappl R), Austrian Society forCybernetic Studies, Vienna, 1996 (proceedings paper)
Érdi P, Aradi I, Grőbler T, Barna G: Matematikai modellek az idegrendszer kutatásában. Fizikai Szemle, (201-207) 1996 (journal paper in Hungarian)
Bazsó F, Lábos E: Application of multivalued threshold logics in canonical splitting of spike records. Fiziologia-Physiology, 10 (53) 1996 (abstract in Hungarian)
Bazsó F, Lábos E: The structure of cyclic activity patterns in formal neural networks. Fiziologia-Physiology, 10 (85) 1996 (abstract in Hungarian)
Lábos E, Bazsó F: Neurons as measuring devices (revisited). Fiziologia-Physiology, 10 (88) 1996 (abstract in Hungarian)
Aradi I, Érdi P: Multicompartmental modeling of neural circuits in the olfactory bulb. Int. J. Neural Systems, 7 (519-527) 1996 (journal paper)
Érdi P: Alternative modeling strategies and their applicationsin the olfactory system and the hippocampus. Neurobiology, 4 (261-263) 1996 (extended abstract)
Aradi I, Érdi P: Simulation of the whole olfactory bulb based on detailed single cell models. Neurobiology, 4 (251-252) 1996 (abstract)
Adorján P, Barna G, Érdi P, Grőbler T, Kepecs Á, Lengyel M, Ventriglia F: Multicompartmental modeling of hippocampal pyramidal cells and interneurons with the GENESIS software tool. Neurobiology, 4 (247-249) 1996 (extended abstract)
Grőbler T, Barna G: Normal and epileptic activities in a population model of the hippocampal CA3 region. Neurobiology, 4 (265-267) 1996 (extended abstract)
Grőbler T: Tanulás biológiai És mestersÉgeshálózatokon. Pszichológia, 16 (409-423) 1996 (journal paper in Hungarian)

1995

Érdi P: Neural modeling: multiple strategies. Biomath-95, Sofia, Bulgaria, (41) 1995 (abstract)
Érdi P: Rhythmogenesis, synchronization, chaos and control in neural systems. Complex Dynamics in Chemistry and Biology, Odense, Denmark, 1995 (abstract)
Aradi I, Érdi P: Rhythmmogenesis in the mitral cells of the olfactory bulb: multicompartmental modeling. Complex Dynamics in Chemistry and Biology, Odense, Denmark, 1995 (abstract)
Grőbler T, Barna G, Adorján P, Fügedi Z, Érdi P: Synchronized activity in a CA3 model. European Journal of Neuroscience, Suppl. 8 (103) 1995 (abstract)
Barna G: Lyapunov exponents from time series: variations for an algorithm. International Journal of Intelligent Systems, 10 (25-39) 1995 (journal paper)
Aradi I, Barna G, Érdi P, Grőbler T: Chaos and learning in the olfactory bulb. International Journal of Intelligent Systems, 10 (89-117) 1995 (journal paper)
Érdi P: The complexity of the brain: structure, function, dynamics. Int. Seminar on Evolutinoary Systems, (ed. Van de Vijver G), Vienna, (51-60) 1995. (proceedings paper)
Érdi P, Aradi I: Signal generation and propagation in the olfactory bulb: multi-compartmental simulations. Int. Workshop Neural Coding, Prague, Czech Republic, (17) 1995 (abstract)
Érdi P: Rhythmogenesis in single cells and population models: olfactory bulb and hippocampus. Int. Workshop Neural Coding, Prague, Czech Republic, (17) 1995 (abstract)
Érdi P: Neurodynamic system theory: neurons, networks, populations. Lecture Notes on Biomathematics and Bioinformatics ’95, (ed. Candev M), Datecs Publ., Sofia, (3-6) 1995 (extended abstract)
Adorján P, Aradi I, Barna G, Érdi P, Grőbler T: Modeling mitral and granule cells of the olfactory bulb with the NEURONsoftware tool. Neurobiology, 3 (3) 1995 (abstract)
Érdi P: Rhythmogenesis, synchronization and control of chaos: neural mechanisms and algorithms. Neurobiology, 3 (44) 1995 (abstract)
Érdi P: Noise-induced transition, signal propagation, synchronizationand chaos controlling in the nervous systems. The Role and Control of Random Events in Biological Systems, Sigtuna, Sweden, 1995 (abstract)

1994

Érdi P: Molecular computation: a dynamic approach. COMBIO’ 94, (41-48) 1994 (proceedings paper)
Érdi P: Noise and chaos in neural systems. Neural Modeling and Neural Networks (ed. Ventriglia F), Pergamon Press, (163-184) 1994 (book chapter)
Grőbler T, Kovács I: Dendritic integration in a CA3 pyramidal cell: quantitative analysis. Neurobiology, 2 (53) 1994 (abstract)
Érdi P, Barna G, Grőbler T, Jakab Z, Ventriglia F: Outline of a model of the hippocampus. Neurobiology, 2 (47) 1994 (abstract)
Barna G, Grőbler T, Jakab Z, Érdi P: Synchronized activity in a CA3 model. Neurobiology, 2 (31) 1994 (abstract)
Aradi I, Grőbler T, Érdi P: Stabilization of a hebbian-type learning rule. Neurobiology, 2 (27) 1994 (abstract)
Érdi P: Rethinking neural networks: quantum fields and biological data. (ed. Pribram KH) Neuropsychologia, 32, 1994 (other)
Tóth J, Szili L, Érdi P: Chemical kinetics: a prototype of nonlinear sciences. The Paradigm of Self-Organization II<, (ed. Dalenoort GJ), Gordon and Breach, London, (184-201) 1994 (book chapter)
Tsuda I, Barna G: How can chaos be a cognitive processor? Towards the Harnessing of Chaos, (ed. Yamaguti M), Elsevier, (47-61) 1994 (book chapter)

1993

Érdi P, Grőbler T, Tóth J: Classification by neurodynamic systems: a reconsideration. Abstracts of the 11th International Biophysics Congress, IUPAB, Budapest, 1993 (abstract)
Érdi P, Grőbler T, Barna G, Kaski K: Dynamics of the olfactory bulb: bifurcations, learning and memory. Biological Cybernetics, 63 (57-66) 1993 (journal paper)
Grőbler T, Érdi P: Dynamic activity, learning, and memory in a model of the olfactory bulb. Computational Neuroscience, (ed. Eeckman FH, Bower JM), Kluwer Acad. Publ., (261-265) 1993 (proceedings paper, published as a book)
Horváth G, Szakál á, Érdi P: Mathematical description of retinal comet-like after images. A modified neural equation. Math. Biosci., 114 (215-248) 1993 (journal paper)
Barna G, Tsuda I: A new method for computing the Lyapunov exponents. Physics Letters A, 175 (421-7) 1993 (journal paper)
Érdi P: Neurodynamic system theory. Theoretical Medicine, 14 (137-152) 1993 (journal paper)

1992

Grőbler T, Érdi P: Dynamic phenomena in the olfactory bulb. Acta Biochim. Biophys. Hung., 26 (61-65) 1992 (journal paper)
Grőbler T, Érdi P, Kaski K: Dynamic phenomena in the olfactory bulb. II.: model for a simple associative memory. Artificial Neural Networks II (ed. Aleksander I, Taylor J), Elsevier, (877-880) 1992 (proceedings paper, published as a book)
Érdi P, Grőbler T, Kaski K: Dynamic phenomena in the olfactory bulb. I.: bifurcation sequences, coexistence of periodicity and chaos, synaptic modification induced transition. Artificial Neural Networks II (ed. Aleksander I, Taylor J), Elsevier, (873-876) 1992 (proceedings paper, published as a book)
Horváth G, Érdi P, Szakál á: Modelling of retial comet-like after images. Cybernetics and Systems ’92 (ed. Trappl R), World Scientific, (733-740) 1992 (proceedings paper, published as a book)
Érdi P, Grőbler T, Tóth J: On the classification of some classification problems. Int. Symp. on Information Physics, Kyushu Inst. Technol., Iizuka, (110-117) 1992 (proceedings paper)
Érdi P, Grőbler T, Marton P: On the double architecture of the semantic memory. Nature, Cognition and Systems II (ed. Carvallo EM), Kluwer Acad. Publ., (193-203) 1992 (book chapter)
Tóth J, Érdi P: The indispensibility of stochastic kinetic models. Nonlinear Dynamics and Exotic Kinetic Phenomena in Chemical Systems (ed. Bazsa G), (117-143) 1992 (book chapter in Hungarian)
Érdi P, Grőbler T, Barna G: Oscillation and chaos in a model of the olfactory bulb. Proc. 2nd Int. Conf. on Fuzzy Logic and Neural Networks, Fuzzy Logic System Institute, Iizuka, (917-20) 1992 (proceedings paper)
Barna G: Statistical approach for computing the largest Lyapunov exponent. Proc. 2nd Int. Conf. on Fuzzy Logic and Neural Networks, Fuzzy Logic System Institute, Iizuka, (921-4) 1992 (proceedings paper)
Barna G, Tsuda I: Chaos in the olfactory bulb. Proc. 4th Int. Symp. on Bioelectronic and Molecular Devices, R&D Association for Future Electron Devices, (19-20) 1992 (proceedings paper)